Stem-loop hbr-MIR408b

Accession

MI0022059

Description

Hevea brasiliensis hbr-MIR408b precursor miRNA

Gene family

MIPF0000102; MIR408

Literature search

1 open access papers mention hbr-MIR408b
(3 sentences)

Sequence

aaagaagaagacauacaaagACUGGGAACAGGCAGAGCAUGAauggagcuacaaacagaaaucucuguuuuggcaccacccaugcacugccucuucccuggcuuguggcucuucuuuuuc
.((((((((((..(((((.(...(((((.((((((.(((((..(((.((((.(((((((....))))))))))).)))..))))).)))))).)))))...))))))..)))))))))).

Structure

a          ca     a ACU     C      A     Aa   a    c       a 
 aagaagaaga  uacaa g   GGGAA AGGCAG GCAUG  ugg gcua aaacaga a
 ||||||||||  ||||| |   ||||| |||||| |||||  ||| |||| |||||||  
 uuuuucuucu  guguu c   cccuu uccguc cguac  acc cggu uuugucu u
c          cg     - ggu     c      a     cc   a    -       c 

Annotation confidence Not enough data

Genome context

KB620950.1: 72023-72142 [+]

Mature hbr-miR408b

• Accession: MIMAT0025289
• Description: Hevea brasiliensis hbr-miR408b mature miRNA
• Sequence: 21 - ACUGGGAACAGGCAGAGCAUGA - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22330773
   Identification of novel microRNAs in Hevea brasiliensis and computational prediction of their targets
   Gébelin V, Argout X, Engchuan W, Pitollat B, Duan C, Montoro P, Leclercq J
   BMC Plant Biol (2012) 12:18