Stem-loop hbr-MIR396b

Accession

MI0022057

Description

Hevea brasiliensis hbr-MIR396b precursor miRNA

Literature search

3 open access papers mention hbr-MIR396b
(13 sentences)

Sequence

augacccucuucguauucUUCCACAGCUUUCUUGAACUGcaucucuacuacgaacuggugguuguugcaugccacggcuggccaauuaagcggcuucuugcuucuuguuuuguugcgguucaauaaagcugugggaagauacuaacagggucaa
.(((((((.((.(((((.((((((((((((.((((((((((.(...((...((((.((.(((((((....((((....))))......))))))).)).).)))..))...).)))))))))).)))))))))))).))))).)).))))))).

Structure

a       c  c     c            C          u ucu  uac   - u  u       --gcau    c 
 ugacccu uu guauu UUCCACAGCUUU UUGAACUGca c   ac   gaa c gg gguuguu      gcca g
 ||||||| || ||||| |||||||||||| |||||||||| |   ||   ||| | || |||||||      ||||  
 acuggga aa cauag agggugucgaaa aacuuggcgu g   ug   cuu g uc ucggcga      cggu g
a       c  u     a            u          u uuu  -uu   c u  u       auuaac    c 

Annotation confidence Not enough data

Genome context

KB622489.1: 62864-63017 [+]

Mature hbr-miR396b

• Accession: MIMAT0025287
• Description: Hevea brasiliensis hbr-miR396b mature miRNA
• Sequence: 19 - UUCCACAGCUUUCUUGAACUG - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22330773
   Identification of novel microRNAs in Hevea brasiliensis and computational prediction of their targets
   Gébelin V, Argout X, Engchuan W, Pitollat B, Duan C, Montoro P, Leclercq J
   BMC Plant Biol (2012) 12:18