Stem-loop hbr-MIR319

Accession

MI0022056

Description

Hevea brasiliensis hbr-MIR319 precursor miRNA

Literature search

1 open access papers mention hbr-MIR319
(1 sentences)

Sequence

guuggaguaaugacugaugagcaguuaagagagcuuucuucaguccagucacggugggcaaugggauuuaauuagcugccgacucauucauccaaauacugaguuaaaggcuagcugagaaaguuacccaguaaaugagugaaugaugcgggagacaaauugaaucuuaugcuuccuguacUUGGACUGAAGGGAGCUCCCUuuacuguuauuuaauccaa
.(((((........(((..((((((.(((.(((((((((((((((((((.((((.(((((.((((((((((((.(((.(((..((((((((.((..(((((.......((.(((((.....))))))))))))..)).))))))))..))).)).).))))))))))))))))).)))))).))))))))))))))))).))).))))))..))).)))))

Structure

g     guaaugac   ug      u   a                 -  c    u     a            a -  g   ac        c  aa     aguuaaa  c     g 
 uugga        uga  agcagu aag gagcuuucuucagucca gu acgg gggca ugggauuuaauu g cu ccg  ucauucau ca  uacug       gg uagcu a
 |||||        |||  |||||| ||| ||||||||||||||||| || |||| ||||| |||||||||||| | || |||  |||||||| ||  |||||       || ||||| g
 aaccu        auu  uuguca uUC CUCGAGGGAAGUCAGGU ca uguc uucgu auucuaaguuaa c ga ggc  aguaagug gu  augac       cc auuga a
-     -------a   ua      u   C                 U  -    c     -            a a  g   gu        a  aa     -------  -     a 

Annotation confidence Not enough data

Genome context

KB629150.1: 30162-30382 [+]

Mature hbr-miR319

• Accession: MIMAT0025286
• Description: Hevea brasiliensis hbr-miR319 mature miRNA
• Sequence: 182 - UUGGACUGAAGGGAGCUCCCU - 202
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22330773
   Identification of novel microRNAs in Hevea brasiliensis and computational prediction of their targets
   Gébelin V, Argout X, Engchuan W, Pitollat B, Duan C, Montoro P, Leclercq J
   BMC Plant Biol (2012) 12:18