Stem-loop ptc-MIR6456

Accession

MI0022038

Description

Populus trichocarpa ptc-MIR6456 precursor miRNA

Sequence

aaaaaucagugcaggaucuagugaaaggacucaagcucgugauagauaauuauuuucuUUGAGUCCUUCCAUUAGAUCCcgcaaugauuuuu
((((((((.(((.((((((((((.(((((((((((...(((((.....)))))....))))))))))).)))))))))).))).))))))))

Structure

        g   a          a           -cuc     a 
aaaaauca ugc ggaucuagug aaggacucaag    gugau g
|||||||| ||| |||||||||| |||||||||||    ||||| a
uuuuuagu acg CCUAGAUUAC UUCCUGAGUUu    uauua u
        a   c          C           cuuu     a 

Annotation confidence Not enough data

Genome context

CM000355.2: 4638249-4638340 [-]

Mature ptc-miR6456

• Accession: MIMAT0025266
• Description: Populus trichocarpa ptc-miR6456 mature miRNA
• Sequence: 59 - UUGAGUCCUUCCAUUAGAUCC - 79
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22442676
   Deep annotation of Populus trichocarpa microRNAs from diverse tissue sets
   Puzey JR, Karger A, Axtell M, Kramer EM
   PLoS One (2012) 7:e33034