Accession
MI0022036
Description
Populus trichocarpa
ptc-MIR6454 precursor miRNA
Sequence
142
reads,
2.0
reads per million, 9 experiments
uagcuggguaacguggaCUUGUAACCUGAGUAGAGGCAauaaagugauauaacauuggcucgcucagcuuAGAAGGUCGGGUCCAGUUA
(((((((...((.((..(((.(((.((((((.(((.((((...((......)))))).))))))))).))).)))..)).)))))))))
(((((((...((.((..(((.(((.((((((.(((.((((...((......)))))).))))))))).))).)))..)).)))))))))
Structure
gua g ga G C A G aaa ga
uagcugg ac ug CUU UAA CUGAGU GAG CAau gu u
||||||| || || ||| ||| |||||| ||| |||| ||
AUUGACC UG GC GAA Auu gacucg cuc guua ca a
--- G UG G c - g --- au
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
Unknown
Database links
Mature ptc-miR6454-5p
| Accession | MIMAT0025264 |
| Description | Populus trichocarpa ptc-miR6454-5p mature miRNA |
| Sequence | 18 - CUUGUAACCUGAGUAGAGGCA - 38 |
| Evidence |
experimental
miRNAseq [1] |
Mature ptc-miR6454-3p
| Accession | MIMAT0055689 |
| Description | Populus trichocarpa ptc-miR6454-3p mature miRNA |
| Sequence | 71 - AGAAGGUCGGGUCCAGUUA - 89 |
| Evidence |
experimental
unknown |
References
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