Accession
MI0022017
Description
Populus trichocarpa
ptc-MIR6442 precursor miRNA
Sequence
83
reads,
2.0
reads per million, 8 experiments
guuugaacuucuugcaugucaAGCCGUUCAAGCCUAGUCUGAAaggucaggagggcgugcuauucggucuaggcCUGAACGGCUUGAAGGGCACGUuguucaggc
((((((((..(.(((...((((((((((((.((((((.(((((.((.((.(....).)))).))))).)))))).))))))))))))...))).)..))))))))
((((((((..(.(((...((((((((((((.((((((.(((((.((.((.(....).)))).))))).)))))).))))))))))))...))).)..))))))))
Structure
uu u aug A U a u g a
guuugaac c ugc ucaAGCCGUUCA GCCUAG CUGAA gg ca g g
|||||||| | ||| |||||||||||| |||||| ||||| || || |
cggacuug G ACG AGUUCGGCAAGU cggauc ggcuu uc gu c g
uU C GGA C u a - g g
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM000348.2: 758346-758450 [-]
Database links
Mature ptc-miR6442-5p
| Accession | MIMAT0055681 |
| Description | Populus trichocarpa ptc-miR6442-5p mature miRNA |
| Sequence | 22 - AGCCGUUCAAGCCUAGUCUGAA - 43 |
| Evidence |
experimental
unknown |
Mature ptc-miR6442-3p
| Accession | MIMAT0025245 |
| Description | Populus trichocarpa ptc-miR6442-3p mature miRNA |
| Sequence | 75 - CUGAACGGCUUGAAGGGCACGU - 96 |
| Evidence |
experimental
miRNAseq [1] |
References
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