Stem-loop ptc-MIR6437a

Accession

MI0022012

Description

Populus trichocarpa ptc-MIR6437a precursor miRNA

Gene family

MIPF0001475; MIR6437

Sequence

uagaggugcuggugcugcuggaggcugguggcggugucuuggcUCACGGACGGCGGCUCCAAGCAgcggcagcggugcuac
(((.(.(((((.(((((((((((.(((.((.(.(((........))).).)).))))))).))))))).))))).).))).

Structure

-   a g     g       -    g   g  g g   ucu 
 uag g ugcug ugcugcu ggag cug ug c gug   u
 ||| | ||||| ||||||| |||| ||| || | |||    
 auc u gcgac gcgACGA CCUC GGC GC G CAC   g
c   g g     g       A    -   G  A G   Ucg 

Annotation confidence Not enough data

Genome context

CM000337.2: 42466065-42466145 [-]

Mature ptc-miR6437a

• Accession: MIMAT0025240
• Description: Populus trichocarpa ptc-miR6437a mature miRNA
• Sequence: 44 - UCACGGACGGCGGCUCCAAGCA - 65
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22442676
   Deep annotation of Populus trichocarpa microRNAs from diverse tissue sets
   Puzey JR, Karger A, Axtell M, Kramer EM
   PLoS One (2012) 7:e33034