Accession
MI0021985
Description
Populus trichocarpa
ptc-MIR6471 precursor miRNA
Sequence
374
reads,
6.0
reads per million, 9 experiments
aucuuuuagcauuuuccaagcaaauugaauuuguaucUUUGGGAUCAUCAGGACAGCCccugcaucgagaauuaugcagaacucuacugaaaugaaacggggaaaaaaaaauuauuucaaccuuugccacaacugacgcaggggCUGCCCCGAUAAUUCCAAAGAUccagugcaaucugcuuguuaaauugcuacuggau
((((..((((((((..((((((.((((...(((.(((((((((((.(((.((.((((((((((.((.((......(((((.......((((((((................))))))))...))))).....)))).)))))))))).)).))).))))))))))).)))..)))).))))))..))).)))))..))))
((((..((((((((..((((((.((((...(((.(((((((((((.(((.((.((((((((((.((.((......(((((.......((((((((................))))))))...))))).....)))).)))))))))).)).))).))))))))))).)))..)))).))))))..))).)))))..))))
Structure
uu - uc a aau u C A A a g aauuau acucuac aacgggg
aucu uagca uuu caagca auug uug aucUUUGGGAU AUC GG CAGCCccugc uc ag gcaga ugaaauga a
|||| ||||| ||| |||||| |||| ||| ||||||||||| ||| || |||||||||| || || ||||| ||||||||
uagg aucgu aaa guucgu uaac gac UAGAAACCUUA UAG CC GUCggggacg ag uc cguuu acuuuauu a
uc u uu c -gu c A C C c - -aacac ----cca aaaaaaa
Annotation confidence
High
Do you think this miRNA is real?
Genome context
CM000342.2: 21307769-21307968 [+]
Database links
Mature ptc-miR6471-5p
| Accession | MIMAT0025210 |
| Description | Populus trichocarpa ptc-miR6471-5p mature miRNA |
| Sequence | 38 - UUUGGGAUCAUCAGGACAGCC - 58 |
| Evidence |
experimental
miRNAseq [1] |
Mature ptc-miR6471-3p
| Accession | MIMAT0055670 |
| Description | Populus trichocarpa ptc-miR6471-3p mature miRNA |
| Sequence | 145 - CUGCCCCGAUAAUUCCAAAGAU - 166 |
| Evidence |
experimental
unknown |
References
|
