miRBase entry: hme-mir-2c

Stem-loop hme-mir-2c


Accession
MI0021768
Description
Heliconius melpomene hme-mir-2c precursor miRNA


Sequence

ucacuaggaacugucgaagagcaauuagggagccgacaaagugguuguggaauguucuauaucugcaUAUCACAGCCAGCUUUGUUGACUucauuguugccacuuagcugcaaauuccugcguga
((((((((((.(((..(((.(((((...((((.(((((((((((((((((.((((.........)))).))))))))).)))))))).))))...)))))..)))....)))..)))))).))))

Structure
    -      -c   --cg   -a     uag    c        -         a    ucu 
ucac uaggaa  ugu    aag  gcaau   ggag cgacaaag ugguugugg augu   a
|||| ||||||  |||    |||  |||||   |||| |||||||| ||||||||| ||||   u
agug guccuu  acg    uuc  cguug   cuUC GUUGUUUC ACCGACACU Uacg   a
    c      aa   ucga   ac     uua    A        G         A    ucu 


Annotation confidence Not enough data
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Genome context
HE671256: 345000-345124 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from hme-mir-2c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hme-miR-2c

Accession MIMAT0024973
Description Heliconius melpomene hme-miR-2c mature miRNA
Sequence 68 - UAUCACAGCCAGCUUUGUUGACU - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22722851
    Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
    "The Heliconius Genome Consortium"
    "Nature (2012) 487:94-98