miRBase entry: hme-mir-12

Stem-loop hme-mir-12

Accession

MI0021731

Description

Heliconius melpomene hme-mir-12 precursor miRNA

Gene family

MIPF0000181; mir-12

Sequence

gaauacuuuuuaauuuugcuaucccuccaguagaagacuagaucuccaaagaagaacgucucauugucucUGAGUAUUACUUCAGGUACUGGUagaaugauaugagaacuaagaucacuuuc
.......(((((.((((..((((.((((((((((((.......(((...(((.((.((......)))))))))).....))))...)))))).))...))))..)))).)))))........

Structure

-gaauacu     a    gc    --c  -      ---    acuagau   caa   a  a  uc 
        uuuua uuuu  uauc   cu ccagua   gaag       cuc   aga ga cg  u
        ||||| ||||  ||||   || ||||||   ||||       |||   ||| || ||   
        agaau aaga  auag   ga GGUCAU   CUUC       GAG   Ucu cu gu  c
cuuucacu     c    gu    uaa  U      GGA    --AUUAU   ---   -  -  ua

Annotation confidence Not enough data

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Genome context

HE669534: 42502-42623 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from hme-mir-12

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature hme-miR-12

Accession	MIMAT0024936
Description	Heliconius melpomene hme-miR-12 mature miRNA
Sequence	71 - UGAGUAUUACUUCAGGUACUGGU - 93
Evidence	experimental Illumina [1]

References

PubMed ID: 22722851
Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
"The Heliconius Genome Consortium"
"Nature (2012) 487:94-98