Stem-loop gma-MIR393i

Accession

MI0021710

Description

Glycine max gma-MIR393i precursor miRNA

Literature search

21 open access papers mention gma-MIR393i
(51 sentences)

Sequence

1323935 reads, 1854.0 reads per million, 178 experiments

guugguggauagUUCCAAAGGGAUCGCAUUGAUCUaauucuuuaucuuccugcauguauuuacuugcagcucugguuuuggaccuuuuuaccgguucacugacuuggaUCAUGCGAUCCCUUAGGAAUUuuccaucgc
..(((((((.((((((.((((((((((((.((((((.............(((((.((....)).)))))....((((.((((((........))))))..)))))))))))))))))))))).)))))).))))))).

Structure

gu       u      A            U      auucuuuaucuuccugcauguauuuacuugcagcucu    -u      uuu 
  uggugga agUUCC AAGGGAUCGCAU GAUCUa                                     gguu  uggacc   u
  ||||||| |||||| |||||||||||| ||||||                                     ||||  ||||||    
  gcuaccu UUAAGG UUCCCUAGCGUA CUaggu                                     ucag  acuugg   u
-c       u      A            -      -------------------------------------    uc      cca 

Annotation confidence High

Genome context

chr10: 46430313-46430450 [+]

Mature gma-miR393i-5p

• Accession: MIMAT0024916
• Description: Glycine max gma-miR393i-5p mature miRNA
• Sequence: 13 - UUCCAAAGGGAUCGCAUUGAUCU - 35
• Evidence: experimental ; Illumina [1]

Mature gma-miR393i-3p

• Accession: MIMAT0054396
• Description: Glycine max gma-miR393i-3p mature miRNA
• Sequence: 109 - UCAUGCGAUCCCUUAGGAAUU - 129
• Evidence: experimental ; unknown

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169