Stem-loop gma-MIR393g

Accession

MI0021708

Description

Glycine max gma-MIR393g precursor miRNA

Literature search

21 open access papers mention gma-MIR393g
(48 sentences)

Sequence

513473 reads, 1198.0 reads per million, 178 experiments

agaggaggcaUCCAAAGGGAUCGCAUUGAUCccaaauccaagcuucaauguucuucucucuuucucacucaaaauguuaauuuuauuugggAUCAUGCUAUCCCUUUGGAUgucuccuu
.((((((((((((((((((((.((((.((((((((((...(((......)))..................(((((....))))))))))))))))))).))))))))))))))))))))

Structure

a                    C    U          ccaagcuucaauguucuucucucuuucucacuc     g 
 gaggaggcaUCCAAAGGGAU GCAU GAUCccaaau                                 aaaau u
 |||||||||||||||||||| |||| ||||||||||                                 |||||  
 uuccucugUAGGUUUCCCUA CGUA CUAggguuua                                 uuuua u
-                    U    -          ---------------------------------     a 

Annotation confidence High

Genome context

chr20: 26105756-26105874 [-]

Mature gma-miR393g-5p

• Accession: MIMAT0024914
• Description: Glycine max gma-miR393g-5p mature miRNA
• Sequence: 11 - UCCAAAGGGAUCGCAUUGAUC - 31
• Evidence: experimental ; Illumina [1]

Mature gma-miR393g-3p

• Accession: MIMAT0054394
• Description: Glycine max gma-miR393g-3p mature miRNA
• Sequence: 92 - AUCAUGCUAUCCCUUUGGAU - 111
• Evidence: experimental ; unknown

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169