Stem-loop gma-MIR393f

Accession

MI0021707

Description

Glycine max gma-MIR393f precursor miRNA

Literature search

21 open access papers mention gma-MIR393f
(48 sentences)

Sequence

532180 reads, 1291.0 reads per million, 178 experiments

ggaggaggcaUCCAAAGGGAUCGCAUUGAUCccaaauccaagcuuuaauauuuuucucucuucucacucaauaauauuaauuuauuugggAUCAUGCUAUCCCUUUGGAUUucuccuu
.(((((((.((((((((((((.((((.((((((((((.......((((((((....................))))))))...)))))))))))))).)))))))))))).)))))))

Structure

g       c            C    U          ccaagcu        uuucucucu 
 gaggagg aUCCAAAGGGAU GCAU GAUCccaaau       uuaauauu         u
 ||||||| |||||||||||| |||| ||||||||||       ||||||||          
 uuccucu UAGGUUUCCCUA CGUA CUAggguuua       aauuauaa         c
-       U            U    -          ----uuu        uaacucacu 

Annotation confidence High

Genome context

chr18: 2419300-2419417 [-]

Mature gma-miR393f-5p

• Accession: MIMAT0024913
• Description: Glycine max gma-miR393f-5p mature miRNA
• Sequence: 11 - UCCAAAGGGAUCGCAUUGAUC - 31
• Evidence: experimental ; Illumina [1]

Mature gma-miR393f-3p

• Accession: MIMAT0054393
• Description: Glycine max gma-miR393f-3p mature miRNA
• Sequence: 91 - AUCAUGCUAUCCCUUUGGAUU - 111
• Evidence: experimental ; unknown

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169