Stem-loop gma-MIR393e

Accession

MI0021706

Description

Glycine max gma-MIR393e precursor miRNA

Literature search

21 open access papers mention gma-MIR393e
(48 sentences)

Sequence

538706 reads, 1384.0 reads per million, 178 experiments

ggaggaggcaUCCAAAGGGAUCGCAUUGAUCccaaauuucagauuuauaaauuugucuuucucuucccuugucaauauuugggaucauuucucuucccuucucaauauuugggAUCAUGCUAUCCCUUUGGAUUccuccuu
.(((((((.((((((((((((.((((.((((((((((..((((((....)))))).........................((((..........))))........)))))))))))))).)))))))))))).)))))))

Structure

g       c            C    U          -------------------------------------------------uu      u 
 gaggagg aUCCAAAGGGAU GCAU GAUCccaaau                                                   cagauu a
 ||||||| |||||||||||| |||| ||||||||||                                                   ||||||  
 uuccucc UAGGUUUCCCUA CGUA CUAggguuua                                                   guuuaa u
-       U            U    -          uaacucuucccuucucuuuacuaggguuuauaacuguucccuucucuuucu      a 

Annotation confidence High

Genome context

chr14: 5137829-5137969 [+]

Mature gma-miR393e-5p

• Accession: MIMAT0024912
• Description: Glycine max gma-miR393e-5p mature miRNA
• Sequence: 11 - UCCAAAGGGAUCGCAUUGAUC - 31
• Evidence: experimental ; Illumina [1]

Mature gma-miR393e-3p

• Accession: MIMAT0054392
• Description: Glycine max gma-miR393e-3p mature miRNA
• Sequence: 114 - AUCAUGCUAUCCCUUUGGAUU - 134
• Evidence: experimental ; unknown

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169