Stem-loop gma-MIR393d

Accession

MI0021705

Description

Glycine max gma-MIR393d precursor miRNA

Literature search

21 open access papers mention gma-MIR393d
(48 sentences)

Sequence

532057 reads, 1276.0 reads per million, 178 experiments

cuagaggaggcaUCCAAAGGGAUCGCAUUGAUCccaaauccaagcuucaauguucuucuaucuuucucacucaaaauauuaauuuuauuugggAUCAUGCUAUCCCUUUGGAUUucuccuuua
.(((((((((.((((((((((((.((((.((((((((((..(((.((.((((((....................)))))))).))))))))))))))))).)))))))))))).)))))))))

Structure

c         c            C    U          cc   c  c      cuucuaucu 
 uagaggagg aUCCAAAGGGAU GCAU GAUCccaaau  aag uu aauguu         u
 ||||||||| |||||||||||| |||| ||||||||||  ||| || ||||||          
 auuuccucu UAGGUUUCCCUA CGUA CUAggguuua  uuu aa uuauaa         u
-         U            U    -          --   u  -      aacucacuc 

Annotation confidence High

Genome context

chr10: 25990586-25990708 [-]

Mature gma-miR393d-5p

• Accession: MIMAT0024911
• Description: Glycine max gma-miR393d-5p mature miRNA
• Sequence: 13 - UCCAAAGGGAUCGCAUUGAUC - 33
• Evidence: experimental ; Illumina [1]

Mature gma-miR393d-3p

• Accession: MIMAT0054391
• Description: Glycine max gma-miR393d-3p mature miRNA
• Sequence: 94 - AUCAUGCUAUCCCUUUGGAUU - 114
• Evidence: experimental ; unknown

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169