Stem-loop gma-MIR164h

Accession

MI0021686

Description

Glycine max gma-MIR164h precursor miRNA

Literature search

18 open access papers mention gma-MIR164h
(38 sentences)

Sequence

239386 reads, 832.0 reads per million, 178 experiments

uugugcaagaUGGAGAAGCAGGGCACGUGCAauacuaccucaugaacacacggcgugugagcucggagaucaaucacauucuuuucugcuucauuugaccaacccagagagauccuaugaguuaguccuuCAUGUGCCCCCCUUCCCCAUCaugacaa
.(((.((.(((((.((((..(((((((((....((((.((((((..(((((...)))))(((..(((((..........)))))...)))((.((((.......)))))).....)))))).))))....)))))))))..)))).))))).))))).

Structure

u   g  a     A    CA         CAau    c      ----------aacacacggcgugug   -uc     ucaa 
 ugu ca gaUGG GAAG  GGGCACGUG    acua cucaug                         agc   ggaga    u
 ||| || ||||| ||||  |||||||||    |||| ||||||                         |||   |||||     
 aca gu CUACC CUUC  CCCGUGUAC    ugau gaguau                         ucg   uuucu    c
a   -  a     C    CC         uucc    u      ccuagagagacccaaccaguuuacu   ucu     uaca 

Annotation confidence High

Genome context

chr9: 49456787-49456944 [-]

Mature gma-miR164h-5p

• Accession: MIMAT0024892
• Description: Glycine max gma-miR164h-5p mature miRNA
• Sequence: 11 - UGGAGAAGCAGGGCACGUGCA - 31
• Evidence: experimental ; Illumina [1]

Mature gma-miR164h-3p

• Accession: MIMAT0054374
• Description: Glycine max gma-miR164h-3p mature miRNA
• Sequence: 131 - CAUGUGCCCCCCUUCCCCAUC - 151
• Evidence: experimental ; unknown

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169