Stem-loop gma-MIR164f

Accession

MI0021684

Description

Glycine max gma-MIR164f precursor miRNA

Literature search

19 open access papers mention gma-MIR164f
(39 sentences)

Sequence

230747 reads, 858.0 reads per million, 178 experiments

aggucuugcUGGAGAAGCAGGGCACGUGCAacuucccucucacucagagacucuaugcuuguucaagcugauuuugCACGUGCUCUCCUUUUCCAGCuugauu
.((((..((((((((((.(((((((((((((..((..((((.....))))......((((....)))).))..))))))))))))).))))))))))..))))

Structure

a    uu          C             cu  -----------------cc    a 
 gguc  gcUGGAGAAG AGGGCACGUGCAa  uc                   ucuc c
 ||||  |||||||||| |||||||||||||  ||                   |||| u
 uuag  CGACCUUUUC UCUCGUGCACguu  ag                   agag c
-    uu          C             uu  ucgaacuuguucguaucuc    a 

Annotation confidence High

Genome context

chr3: 43533079-43533181 [+]

Mature gma-miR164f-5p

• Accession: MIMAT0024890
• Description: Glycine max gma-miR164f-5p mature miRNA
• Sequence: 10 - UGGAGAAGCAGGGCACGUGCA - 30
• Evidence: experimental ; Illumina [1]

Mature gma-miR164f-3p

• Accession: MIMAT0054372
• Description: Glycine max gma-miR164f-3p mature miRNA
• Sequence: 77 - CACGUGCUCUCCUUUUCCAGC - 97
• Evidence: experimental ; unknown

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169