Stem-loop gma-MIR164e

Accession

MI0021683

Description

Glycine max gma-MIR164e precursor miRNA

Literature search

18 open access papers mention gma-MIR164e
(38 sentences)

Sequence

227506 reads, 818.0 reads per million, 176 experiments

gcuacuuguUGGAGAAGCAGGGCACGUGCAacucucucggcucucuuuaagcgccauugaacccuuugCACGUGCUCCCCUUCUCCAACacggcu
(((...(((((((((((..((((((((((((.....(((((.((.....)).)))...)).....))))))))))))..))))))))))).))).

Structure

-   acu           CA            cucuc  ---   u  c 
 gcu   uguUGGAGAAG  GGGCACGUGCAa     uc   ggc cu u
 |||   |||||||||||  ||||||||||||     ||   ||| || u
 cgg   aCAACCUCUUC  CUCGUGCACguu     ag   ccg ga u
u   --c           CC            uccca  uua   c  a 

Annotation confidence High

Genome context

chr2: 1535426-1535520 [+]

Mature gma-miR164e-5p

• Accession: MIMAT0024889
• Description: Glycine max gma-miR164e-5p mature miRNA
• Sequence: 10 - UGGAGAAGCAGGGCACGUGCA - 30
• Evidence: experimental ; Illumina [1]

Mature gma-miR164e-3p

• Accession: MIMAT0054371
• Description: Glycine max gma-miR164e-3p mature miRNA
• Sequence: 69 - CACGUGCUCCCCUUCUCCAAC - 89
• Evidence: experimental ; unknown

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169