Stem-loop hbr-MIR6175

Accession

MI0021486

Description

Hevea brasiliensis hbr-MIR6175 precursor miRNA

Sequence

uaaugugacccccucuugagccuuaagauucaccaaaagugguauuuuucauacuaucaagcagcuuuauagggaggagaauuuugcaaaaugccaccauuUGGUGGCUUUUAGGGCUCAAGuggguuccacucccaaguc
....(((...(((.((((((((((((((.((((((((.((((((((((.((..((((.(((...))).))))............)).))))))))))..)))))))).)))))))))))))).)))...))).........

Structure

-----uaau   acc   u              u        -a          u  ----------ua    c   c 
         gug   ccc cuugagccuuaaga ucaccaaa  gugguauuuu ca            cuau aag  
         |||   ||| |||||||||||||| ||||||||  |||||||||| ||            |||| ||| a
         cac   ggg GAACUCGGGAUUUU GGUGGUuu  caccguaaaa gu            gaua uuc  
cugaacccu   cuu   u              C        ac          c  uuuaagaggagg    u   g 

Annotation confidence Not enough data

Genome context

KB620083.1: 42672-42812 [-]

Mature hbr-miR6175

• Accession: MIMAT0024796
• Description: Hevea brasiliensis hbr-miR6175 mature miRNA
• Sequence: 102 - UGGUGGCUUUUAGGGCUCAAG - 122
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22407387
   Genome-wide analysis of microRNAs in rubber tree (Hevea brasiliensis L.) using high-throughput sequencing
   "Lertpanyasampatha M, Gao L, Kongsawadworakul P, Viboonjun U, Chrestin H, Liu R, Chen X, Narangajavana J"
   "Planta (2012) 236:437-445