Stem-loop hbr-MIR6173

Accession

MI0021483

Description

Hevea brasiliensis hbr-MIR6173 precursor miRNA

Sequence

cgcugugcguaucgacccgugcaguauccaucguuuaaagcuaggggagcggaaugggauuagauaccccaguaguccuaAGCCGUAAACGAUGGAUACUgcacgggucgauacggcacagcgcuguagcuaacgcguua
(((((((((((((((((((((((((((((((((((((..(((..((((.(....((((.........))))...))))).)))..))))))))))))))))))))))))))))).)))))))).....((....))....

Structure

-----------------        -                             aa   ag    g ggaa    auu 
                 cgcugugc guaucgacccgugcaguauccaucguuua  gcu  ggga c    uggg   a
                 |||||||| |||||||||||||||||||||||||||||  |||  |||| |    ||||   g
                 gcgacacg cauagcugggcacgUCAUAGGUAGCAAAU  CGA  uccu g    accc   a
auugcgcaaucgauguc        g                             GC   -a    - -aug    cau 

Annotation confidence Not enough data

Genome context

Unknown

Mature hbr-miR6173

• Accession: MIMAT0024793
• Description: Hevea brasiliensis hbr-miR6173 mature miRNA
• Sequence: 81 - AGCCGUAAACGAUGGAUACU - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22407387
   Genome-wide analysis of microRNAs in rubber tree (Hevea brasiliensis L.) using high-throughput sequencing
   "Lertpanyasampatha M, Gao L, Kongsawadworakul P, Viboonjun U, Chrestin H, Liu R, Chen X, Narangajavana J"
   "Planta (2012) 236:437-445