Stem-loop ptr-mir-6131

Accession

MI0021266

Description

Pan troglodytes ptr-mir-6131 precursor miRNA

Sequence

ucccgcauucccucugcuuuggucagguggugcccuccuuccauggguagagccagagaugguggguucuGGCUGGUCGGAUGGGAGUGgacagagacccgggguccua
.....(((((((((((..(((((((((....((((.((.((..(((......)))..)).)).))))))))))))).)))).)))))))...((.((((...)))))).

Structure

---------------ucccg       -    cu         uggu    u  u  ca   gu 
                    cauuccc ucug  uuggucagg    gccc cc uc  ugg  a
                    ||||||| ||||  |||||||||    |||| || ||  |||   
                    GUGAGGG AGGC  GGUCGGucu    uggg gg ag  acc  g
auccuggggcccagagacag       U    -U         ----    u  u  ag   ga 

Annotation confidence Not enough data

Genome context

chr5: 10743768-10743876 [+]

Mature ptr-miR-6131

• Accession: MIMAT0024605
• Description: Pan troglodytes ptr-miR-6131 mature miRNA
• Sequence: 71 - GGCUGGUCGGAUGGGAGUG - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22454130
   Transcription factors are targeted by differentially expressed miRNAs in primates
   "Dannemann M, Prufer K, Lizano E, Nickel B, Burbano HA, Kelso J"
   "Genome Biol Evol (2012) 4:552-564