Accession
MI0021252
Description
Linum usitatissimum
lus-MIR393d precursor miRNA
Literature search
2 open access papers mention lus-MIR393d
(23 sentences)
(23 sentences)
Sequence
626
reads,
125.0
reads per million, 22 experiments
cuucuccaucuguucuucgucagcuuugauuagugcaguuugagaguUCCAAAGGGAUCGCAUUGAUCuaaucaugaugaugauauauauaucuauauaucuuccaccaguuaguuaauuguuagAUCAUGCGAUCCCUUUCGAAUucuccaucucugccucuaaacuacauacccagcuaagaagcuagcuagcagcagauuauauacugguaaag
(((..(((((((((((..((.((((((..(((((((((...((((((((.(((((((((((((.((((((((..((((((.((((((((....)))))))).)).........))))...))))))))))))))))))))).)))))))).....))))..................))))))))))).)).)).))))))........)))..)))
(((..(((((((((((..((.((((((..(((((((((...((((((((.(((((((((((((.((((((((..((((((.((((((((....)))))))).)).........))))...))))))))))))))))))))).)))))))).....))))..................))))))))))).)).)).))))))........)))..)))
Structure
cu -------- - uc c ga ------------------ --uuu C U -ca --------- u u cuu cca ucuguu cu gu agcuuu uuagu gcag gagaguUC AAAGGGAUCGCAU GAUCuaau ugau ga gauauaua a ||| ||| |||||| || || |||||| ||||| |||| |||||||| ||||||||||||| |||||||| |||| || |||||||| gaa ggu agacga ga cg ucgaag aaucg cguc cucuUAAG UUUCCCUAGCGUA CUAgauug auug cu cuauauau u au cauauauu c -u a -- acccauacaucaaaucuc ucuac C - uua auugaccac u c
Annotation confidence
High
Do you think this miRNA is real?
Genome context
Unknown
Database links
Mature lus-miR393d-5p
| Accession | MIMAT0027232 |
| Description | Linum usitatissimum lus-miR393d-5p mature miRNA |
| Sequence | 48 - UCCAAAGGGAUCGCAUUGAUC - 68 |
| Evidence | not_experimental |
Mature lus-miR393d-3p
| Accession | MIMAT0058447 |
| Description | Linum usitatissimum lus-miR393d-3p mature miRNA |
| Sequence | 126 - AUCAUGCGAUCCCUUUCGAAU - 146 |
| Evidence |
experimental
unknown |
References
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