Accession
MI0021249
Description
Linum usitatissimum
lus-MIR393c precursor miRNA
Literature search
2 open access papers mention lus-MIR393c
(23 sentences)
(23 sentences)
Sequence
591
reads,
113.0
reads per million, 23 experiments
aagaauugaaagaaguugguuuccugcaacuagaggaggcaUCCAAAGGGAUCGCAUUGAUCccagcuaccuaccugccuaaccaaauucacagucuuggAUCAUGCUAUCCCUUUGGAUUucuccuuugguagcuuuggguuguguguuuuucucucaacucuu
((((.((((.(((((.......(((((.(((((((((((.((((((((((((.((((.(((((.((((.......((......)).......)).)).))))))))).)))))))))))).))))))))))).))...))).........))))).)))).))))
((((.((((.(((((.......(((((.(((((((((((.((((((((((((.((((.(((((.((((.......((......)).......)).)).))))))))).)))))))))))).))))))))))).))...))).........))))).)))).))))
Structure
a a --uugguuu --- a c C U c - accuacc cc
aaga uuga agaag ccu gc acuagaggagg aUCCAAAGGGAU GCAU GAUCc ag cu ug u
|||| |||| ||||| ||| || ||||||||||| |||||||||||| |||| ||||| || || ||
uucu aacu ucuuu ggg cg ugguuuccucu UAGGUUUCCCUA CGUA CUAgg uc ga ac a
c c uuguguguu uuu a U U - u u cacuuaa ca
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
Unknown
Database links
Mature lus-miR393c-5p
| Accession | MIMAT0027229 |
| Description | Linum usitatissimum lus-miR393c-5p mature miRNA |
| Sequence | 42 - UCCAAAGGGAUCGCAUUGAUC - 62 |
| Evidence | not_experimental |
Mature lus-miR393c-3p
| Accession | MIMAT0058444 |
| Description | Linum usitatissimum lus-miR393c-3p mature miRNA |
| Sequence | 101 - AUCAUGCUAUCCCUUUGGAUU - 121 |
| Evidence |
experimental
unknown |
References
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