Stem-loop lus-MIR166g

Accession

MI0021243

Description

Linum usitatissimum lus-MIR166g precursor miRNA

Literature search

2 open access papers mention lus-MIR166g
(5 sentences)

Sequence

1364960 reads, 243802.0 reads per million, 24 experiments

cuuuugaggGGAAUGUUGUCUGGCUCGAGGccacucuugcucggauuuaugauucgauuagugacgUCGGACCAGGCUUCAUUCCCCccaauug
...(((.((((((((..((((((.((((.(.((((.....(((((((...)))))))..)))).).)))).))))))..)))))))).)))...

Structure

cuu   a        UU      C    G c    cuugc       u 
   uug ggGGAAUG  GUCUGG UCGA G cacu     ucggauu  
   ||| ||||||||  |||||| |||| | ||||     ||||||| a
   aac CCCCUUAC  CGGACC GGCU c guga     agcuuag  
guu   c        UU      A    g a    ---uu       u 

Annotation confidence High

Genome context

Unknown

Mature lus-miR166g-5p

• Accession: MIMAT0058439
• Description: Linum usitatissimum lus-miR166g-5p mature miRNA
• Sequence: 10 - GGAAUGUUGUCUGGCUCGAGG - 30
• Evidence: experimental ; unknown

Mature lus-miR166g-3p

• Accession: MIMAT0027223
• Description: Linum usitatissimum lus-miR166g-3p mature miRNA
• Sequence: 67 - UCGGACCAGGCUUCAUUCCCC - 87
• Evidence: not_experimental

References

1. PubMed ID: 23291876
   Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
   "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
   "Planta (2013) 237:1149-1161