Stem-loop lus-MIR167e

Accession

MI0021185

Description

Linum usitatissimum lus-MIR167e precursor miRNA

Literature search

3 open access papers mention lus-MIR167e
(5 sentences)

Sequence

ugaguacuucuccaucuaugguccguggagcagcagcaguUGAAGCUGCCAGCAUGAUCUAaacuuccuuugaaaggaaaaagaggaagaaggaagaucugagaucauaugacaguuucaccuguugauguccuucacgaucgaucgaucgacaccacuca
(((((.....((.(((.((.(..(((((((((.((((((.((((((((.((..(((((((...((((((((.................)))))))).....))))))).)).)))))))).)))))).))..)))))))..).)).))).))....)))))

Structure

     acuuc  c   u  g uc       --  g      u        C  GC       --Aaa        gaaagga 
ugagu     uc auc au g  cguggag  ca cagcag UGAAGCUG CA  AUGAUCU     cuuccuuu       a
|||||     || ||| || |  |||||||  || |||||| |||||||| ||  |||||||     ||||||||       a
acuca     ag uag ua c  gcacuuc  gu guuguc acuuugac gu  uacuaga     gaaggaag       a
     -ccac  c   c  g ua       cu  a      c        a  -a       gucua        aaggaga 

Annotation confidence Not enough data

Genome context

Unknown

Mature lus-miR167e

• Accession: MIMAT0027165
• Description: Linum usitatissimum lus-miR167e mature miRNA
• Sequence: 41 - UGAAGCUGCCAGCAUGAUCUA - 61
• Evidence: not_experimental

References

1. PubMed ID: 23291876
   Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
   "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
   "Planta (2013) 237:1149-1161