Stem-loop lus-MIR395b

Accession

MI0021153

Description

Linum usitatissimum lus-MIR395b precursor miRNA

Literature search

1 open access papers mention lus-MIR395b
(8 sentences)

Sequence

4713 reads, 1014.0 reads per million, 24 experiments

accaggucuccccuggaGUUCCCCUGAACGCUUCACUgagaggcucugucauucuuaCUGAAGUGUUUGGGGGAACUCuggcuguggcuuggu
((((((((.(..(((((((((((((((((((((((.((((((((...)))..))))).)))))))))))))))))))))))..).))))))))

Structure

        u cc                       C     --   u 
accagguc c  cuggaGUUCCCCUGAACGCUUCA Ugaga  ggc  
|||||||| |  ||||||||||||||||||||||| |||||  ||| c
ugguucgg g  gguCUCAAGGGGGUUUGUGAAGU auucu  cug  
        u uc                       C     ua   u 

Annotation confidence High

Genome context

Unknown

Mature lus-miR395b-5p

• Accession: MIMAT0058367
• Description: Linum usitatissimum lus-miR395b-5p mature miRNA
• Sequence: 18 - GUUCCCCUGAACGCUUCACU - 37
• Evidence: experimental ; unknown

Mature lus-miR395b-3p

• Accession: MIMAT0027133
• Description: Linum usitatissimum lus-miR395b-3p mature miRNA
• Sequence: 58 - CUGAAGUGUUUGGGGGAACUC - 78
• Evidence: not_experimental

References

1. PubMed ID: 23291876
   Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
   "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
   "Planta (2013) 237:1149-1161