Stem-loop bta-mir-6120

Accession

MI0021138

Description

Bos taurus bta-mir-6120 precursor miRNA

Sequence

3368 reads, 29 reads per million, 69 experiments

ucCUGUUCCCGUUUUUCACAUGUGuacugauguuugaucaUAUGUUGGACAACGUGGAUAGCacccgugag
..((((((.((((.((((((((((..(........)..)))))).)))).)))).))))))..........

Structure

--------uc      C    U    -      ua uga 
          CUGUUC CGUU UUCA CAUGUG  c   u
          |||||| |||| |||| ||||||  |    
          GAUAGG GCAA AGGU GUAUac  g   g
gagugcccaC      U    C    U      ua uuu 

Annotation confidence Not enough data

Genome context

chr7: 46077154-46077224 [+]

Mature bta-miR-6120-5p

• Accession: MIMAT0024590
• Description: Bos taurus bta-miR-6120-5p mature miRNA
• Sequence: 3 - CUGUUCCCGUUUUUCACAUGUG - 24
• Evidence: experimental ; Illumina [1-3]

Mature bta-miR-6120-3p

• Accession: MIMAT0024591
• Description: Bos taurus bta-miR-6120-3p mature miRNA
• Sequence: 41 - UAUGUUGGACAACGUGGAUAGC - 62
• Evidence: experimental ; Illumina [1-3]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026


2. PubMed ID: 22298343
   Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
   Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
   J Cell Biochem (2012) 113:2098-2111


3. PubMed ID: 23100578
   Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
   "Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
   "J Anim Sci (2013) 91:90-103