miRBase entry: cca-MIR399

Stem-loop cca-MIR399


Accession
MI0021086
Description
Cynara cardunculus cca-MIR399 precursor miRNA


Sequence

guauuacugggcaauuacucuuuuagcaguuuguaagcaacaugcuaccucuaacUGCCAAAGGAGAUUUGCCCUGuaauaca
(((((((.((((((.(.(((((((.((((((.(..((((...))))....).)))))).)))))))).)))))).))))))).

Structure
-       u      u a       a      u --ua    a 
 guauuac gggcaa u cucuuuu gcaguu g    agca  
 ||||||| |||||| | ||||||| |||||| |    |||| c
 cauaauG CCCGUU A GAGGAAA CGUcaa c    ucgu  
a       U      U -       C      u ucca    a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cca-miR399

Accession MIMAT0024533
Description Cynara cardunculus cca-miR399 mature miRNA
Sequence 56 - UGCCAAAGGAGAUUUGCCCUG - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22272770
    The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
    De Paola D, Cattonaro F, Pignone D, Sonnante G
    BMC Genomics (2012) 13:41