miRBase entry: cca-MIR395c

Stem-loop cca-MIR395c


Accession
MI0021082
Description
Cynara cardunculus cca-MIR395c precursor miRNA

Literature search
1 open access papers mention cca-MIR395c
(1 sentences)

Sequence

aagugucccucagagauccuccgaacacuucauugggauguuuuguuuaggauuuccuaCUGAAGUGUUUGGAGGAACUCcaagcgucgcuu
(((((.(.((..(((.((((((((((((((((.(((((.(((((....))))).))))).)))))))))))))))).)))..)).).)))))

Structure
     u c  ca   a                u     u     g 
aagug c cu  gag uccuccgaacacuuca uggga guuuu u
||||| | ||  ||| |||||||||||||||| ||||| |||||  
uucgc g ga  CUC AGGAGGUUUGUGAAGU auccu uagga u
     u c  ac   A                C     u     u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cca-miR395c

Accession MIMAT0024528
Description Cynara cardunculus cca-miR395c mature miRNA
Sequence 60 - CUGAAGUGUUUGGAGGAACUC - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22272770
    The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
    De Paola D, Cattonaro F, Pignone D, Sonnante G
    BMC Genomics (2012) 13:41