miRBase entry: cca-MIR390

Stem-loop cca-MIR390


Accession
MI0021077
Description
Cynara cardunculus cca-MIR390 precursor miRNA

Literature search
2 open access papers mention cca-MIR390
(6 sentences)

Sequence

uccaggAAGCUCAGGAGGGAUAGCGUCauaaacagaucuuuuauucaacggaauguuuaugacguuauccauccugagcuucaugggu
((((.(((((((((((.(((((((((((((((((..(((.((....)).))).))))))))))))))))).))))))))))).)))).

Structure
-    g           G                 ga   u  a 
 ucca gAAGCUCAGGA GGAUAGCGUCauaaaca  ucu uu u
 |||| ||||||||||| |||||||||||||||||  ||| ||  
 gggu cuucgaguccu ccuauugcaguauuugu  agg aa u
u    a           a                 -a   c  c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cca-miR390

Accession MIMAT0024523
Description Cynara cardunculus cca-miR390 mature miRNA
Sequence 7 - AAGCUCAGGAGGGAUAGCGUC - 27
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22272770
    The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
    De Paola D, Cattonaro F, Pignone D, Sonnante G
    BMC Genomics (2012) 13:41