miRBase entry: cca-MIR164

Stem-loop cca-MIR164


Accession
MI0021069
Description
Cynara cardunculus cca-MIR164 precursor miRNA

Literature search
4 open access papers mention cca-MIR164
(4 sentences)

Sequence

cuuuguUGGAGAAGCAGGGUACGUGCAacgauagaaacgacgaguuguuguuuauugcacgugcucuaccucuccaacguaga
((.(((((((((.(.(((((((((((((.(((((.(((.....))).)))))..))))))))))))).).))))))))).)).

Structure
-  u         A C             -c     a   g 
 cu uguUGGAGA G AGGGUACGUGCAa  gauag aac a
 || ||||||||| | |||||||||||||  ||||| ||| c
 ga gcaaccucu c ucucgugcacguu  uuguu uug g
a  u         c a             au     g   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cca-miR164

Accession MIMAT0024515
Description Cynara cardunculus cca-miR164 mature miRNA
Sequence 7 - UGGAGAAGCAGGGUACGUGCA - 27
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22272770
    The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
    De Paola D, Cattonaro F, Pignone D, Sonnante G
    BMC Genomics (2012) 13:41