Stem-loop mse-mir-6100

Accession

MI0021062

Description

Manduca sexta mse-mir-6100 precursor miRNA

Sequence

caccauaaucccaccaacggcuuuaugccaccuuauccuugcgaguauaauaauauccuauaauaucuaCUCGCAAGGGUAAGGUGGGAUGaggacggguga
...........((((..((.((((((.((((((((((((((((((((..(((.(((...))).))).)))))))))))))))))))).)))))).)))))).

Structure

caccauaaucc    aa  g      g                    ua   a   c 
           cacc  cg cuuuau ccaccuuauccuugcgagua  aua uau  
           ||||  || |||||| ||||||||||||||||||||  ||| ||| c
           gugg  gc ggaGUA GGUGGAAUGGGAACGCUCau  uau aua  
----------a    --  a      G                    -c   a   u 

Annotation confidence Not enough data

Genome context

JH668536.1: 258541-258642 [-]

Mature mse-miR-6100

• Accession: MIMAT0024508
• Description: Manduca sexta mse-miR-6100 mature miRNA
• Sequence: 70 - CUCGCAAGGGUAAGGUGGGAUG - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22406339
   Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
   "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
   "Insect Biochem Mol Biol (2012) 42:381-395