Stem-loop mse-mir-1a

Accession

MI0021033

Description

Manduca sexta mse-mir-1a precursor miRNA

Literature search

0 open access papers mention mse-mir-1a
(0 sentences)

Sequence

aagaaaaggccuugcgcgaguuccgugcuuccuuacuucccauagugcuuauaaucauaUGGAAUGUAAAGAAGUAUGGAGcugcgcgggcguguccccgag
..((..(.((((.((((.(((((((((((((.((((...(((((.............)))))...)))).))))))))))))))))))))).).))......

Structure

----aa  aa g    u    g             c    uuc     gugcu 
      ga  a gccu gcgc aguuccgugcuuc uuac   ccaua     u
      ||  | |||| |||| ||||||||||||| ||||   |||||     a
      cu  u cggg cgcg ucGAGGUAUGAAG AAUG   GGUau     u
gagccc  -g g    -    -             A    UAA     acuaa 

Annotation confidence Not enough data

Genome context

JH668637.1: 13777-13878 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mse-mir-1a

Mature mse-miR-1a

• Accession: MIMAT0024483
• Description: Manduca sexta mse-miR-1a mature miRNA
• Sequence: 60 - UGGAAUGUAAAGAAGUAUGGAG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22406339
   Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
   "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
   "Insect Biochem Mol Biol (2012) 42:381-395