Stem-loop mse-mir-279b

Accession

MI0020976

Description

Manduca sexta mse-mir-279b precursor miRNA

Sequence

aagacagaccugccacugguugcaguugauggguauaggucuaguaacacaguuuuaauauucugUGACUAGAUCUACACUCAUUGAuugcuuccaguu
..............(((((..(((((((((((((.((((((((((..(((((..(....)..))))))))))))))).)))))))))))))..))))).

Structure

aagacagaccugcc     uu             a          aa     uu u 
              acugg  gcaguugaugggu uaggucuagu  cacag  u a
              |||||  ||||||||||||| ||||||||||  |||||  |  
              ugacc  cguuAGUUACUCA AUCUAGAUCA  GUguc  a a
-------------u     uu             C          --     uu u 

Annotation confidence Not enough data

Genome context

JH668768.1: 163114-163212 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mse-mir-279b

Mature mse-miR-279b

• Accession: MIMAT0024427
• Description: Manduca sexta mse-miR-279b mature miRNA
• Sequence: 66 - UGACUAGAUCUACACUCAUUGA - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22406339
   Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
   "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
   "Insect Biochem Mol Biol (2012) 42:381-395