Stem-loop mes-MIR394a

Accession

MI0020966

Description

Manihot esculenta mes-MIR394a precursor miRNA

Literature search

3 open access papers mention mes-MIR394a
(14 sentences)

Sequence

ucauguggguuuaacaaaggguuucuuacagaguuuaUUGGCAUUCUGUCCACCUCCcaucuguagaaaucugucucucucacgagcucacauggaggugggcauacugccaacugagcucuguuggucucucuuuguaaaacucucguga
(((((.((((((.((((((((...((.((((((((((((((((...(((((((((((....(((.((..((((.......)).))..))))).)))))))))))...)))))).)))))))))).))...)))))))).)))))).)))))

Structure

     u      a        uuu  u          -      UUC           cauc   a  aa  -  uc 
ucaug ggguuu acaaaggg   cu acagaguuua UUGGCA   UGUCCACCUCC    ugu ga  uc ug  u
||||| |||||| ||||||||   || |||||||||| ||||||   |||||||||||    ||| ||  || ||  c
agugc cucaaa uguuucuc   gg ugucucgagu aaccgu   acggguggagg    aca cu  ag ac  u
     u      a        ucu  u          c      cau           ---u   -  cg  c  uc 

Annotation confidence Not enough data

Genome context

scaffold09683: 173393-173543 [+]

Mature mes-miR394a

• Accession: MIMAT0024417
• Description: Manihot esculenta mes-miR394a mature miRNA
• Sequence: 38 - UUGGCAUUCUGUCCACCUCC - 57
• Evidence: not_experimental

References

1. Overview of the potential of microRNAs and their target gene detection for cassava (Manihot esculenta) improvement
   "Amiteye S, Corral JM, Sharbel TF"
   African J Biotech. (2011) 10:2562-2573