Stem-loop ppy-mir-4796

Accession

MI0020947

Description

Pongo pygmaeus ppy-mir-4796 precursor miRNA

Sequence

aggcucaagucauggcaguaaauuugugucuauacucugucacuuuacuuuuggccucaagucauugcagUAAAGUGGCAGAGUAUAGACACAaauuuaggccuucuuccu
(((...(((....(((..(((((((((((((((((((((((((((((((..((((.....))))....))))))))))))))))))))))))))))))).)))..))))))

Structure

   cuc   ucau   ag                               --uu    c 
agg   aag    ggc  uaaauuugugucuauacucugucacuuuacu    uggc u
|||   |||    |||  |||||||||||||||||||||||||||||||    |||| c
ucc   uuc    ccg  auuuaaACACAGAUAUGAGACGGUGAAAUga    acug a
   ---   --uu   -g                               cguu    a 

Annotation confidence Not enough data

Genome context

chr3: 18054080-18054190 [+]

Mature ppy-miR-4796

• Accession: MIMAT0024399
• Description: Pongo pygmaeus ppy-miR-4796 mature miRNA
• Sequence: 71 - UAAAGUGGCAGAGUAUAGACACA - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116