Stem-loop ppy-mir-3173

Accession

MI0020943

Description

Pongo pygmaeus ppy-mir-3173 precursor miRNA

Sequence

gagucuuuguuggucuugggccagcuucccugcccugccuguuuucuccuuugugauuuuaugagagcaAAGGAGGAAAUAGGCAGGCCAGggaaaugcucucucucuccc
((((....(((((((...)))))))(((((((.(((((((((((((((((((((..((....))..))))))))))))))))))))).)))))))..))))..........

Structure

----------    cuuuguuggucuugggccagc       c                     ga  u 
          gagu                     uucccug ccugccuguuuucuccuuugu  uu u
          ||||                     ||||||| |||||||||||||||||||||  ||  
          cucg                     aaggGAC GGACGGAUAAAGGAGGAAacg  ag a
cccucucucu    -------------------ua       C                     ag  u 

Annotation confidence Not enough data

Genome context

chr14: 96548767-96548877 [-]

Mature ppy-miR-3173

• Accession: MIMAT0024395
• Description: Pongo pygmaeus ppy-miR-3173 mature miRNA
• Sequence: 70 - AAGGAGGAAAUAGGCAGGCCAG - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116