Stem-loop ppy-mir-4774

Accession

MI0020930

Description

Pongo pygmaeus ppy-mir-4774 precursor miRNA

Sequence

uagauuagccuauauuguugUCUGGUAUGUAGUAGGUAAUAAcugacaaacagacaauugccuaacaugugccagaaaacaacauaggcaaggcuugcgguuacaaaauaau
.......((((((.(((((.((((((((((..((((((((..(((.....)))...))))))))..)))))))))).))))).)))))).......................

Structure

----------------uagauua      a     g          AG        -AA   a 
                       gccuau uuguu UCUGGUAUGU  UAGGUAAU   cug c
                       |||||| ||||| ||||||||||  ||||||||   ||| a
                       cggaua aacaa agaccgugua  auccguua   gac a
uaauaaaacauuggcguucggaa      c     a          ca        aca   a 

Annotation confidence Not enough data

Genome context

chr2B: 58589533-58589644 [+]

Mature ppy-miR-4774

• Accession: MIMAT0024382
• Description: Pongo pygmaeus ppy-miR-4774 mature miRNA
• Sequence: 21 - UCUGGUAUGUAGUAGGUAAUAA - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116