Stem-loop ppy-mir-3155a

Accession

MI0020916

Description

Pongo pygmaeus ppy-mir-3155a precursor miRNA

Sequence

cacuuuugagaugccuguuccgggcaucagcucccacugcagaggcuggggagccggacagcucccuuccCAGGCUCUGCAGUGGGAACGGAugccuggaacaguuccugca
...........(((((((((((((((((.(.(((((((((((((.((((((((..(((....))))))))))).))))))))))))).).)))))))))))))).....)))

Structure

cacuuuugaga   -----              a c             g        cc   c 
           ugc     cuguuccgggcauc g ucccacugcagag cuggggag  gga a
           |||     |||||||||||||| | ||||||||||||| ||||||||  |||  
           acg     gacaagguccguAG C AGGGUGACGUCUC GACccuuc  ccu g
-----------   uccuu              G A             G        --   c 

Annotation confidence Not enough data

Genome context

chr10: 6515543-6515654 [+]

Mature ppy-miR-3155a

• Accession: MIMAT0024368
• Description: Pongo pygmaeus ppy-miR-3155a mature miRNA
• Sequence: 71 - CAGGCUCUGCAGUGGGAACGGA - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116