Stem-loop mml-mir-1271

Accession

MI0020863

Description

Macaca mulatta mml-mir-1271 precursor miRNA

Sequence

668 reads, 6 reads per million, 8 experiments

ccccagcacccagaucagugCUUGGCACCUAGCAAGCACUCAguaaauacuuguugaGUGCCUGCUAUGUGCCGGGCAuugugcugagggcuuuguggggauccagagg
(((((((.(((((..(((((((((((((.(((((.(((((((((((....))))))))))).))))).)))))))))))))..))).))))....))))).........

Structure

---------     ----  a  -   au             C     A           a 
         cccca    gc cc cag  cagugCUUGGCAC UAGCA GCACUCAguaa u
         |||||    || || |||  ||||||||||||| ||||| |||||||||||  
         ggggu    cg gg guc  guuACGGGCCGUG AUCGU CGUGaguuguu a
ggagaccua     guuu  -  a   gu             U     C           c 

Annotation confidence High

Genome context

chr6: 174823229-174823337 [+]

Mature mml-miR-1271-5p

• Accession: MIMAT0024315
• Description: Macaca mulatta mml-miR-1271-5p mature miRNA
• Sequence: 21 - CUUGGCACCUAGCAAGCACUCA - 42
• Evidence: experimental ; Illumina [1-2]

Mature mml-miR-1271-3p

• Accession: MIMAT0027108
• Description: Macaca mulatta mml-miR-1271-3p mature miRNA
• Sequence: 58 - GUGCCUGCUAUGUGCCGGGCA - 78
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45