Stem-loop mml-mir-4446

Accession

MI0020858

Description

Macaca mulatta mml-mir-4446 precursor miRNA mir-4446

Gene
family

RF03251; mir-4446

Sequence

19288 reads, 131 reads per million, 8 experiments

uacuucaggauugaugaguccgguggcucugguCCAUUUCCCUGCCAUUCCCUUGGCuucaauuuacuccCAGGGCUGGCAGUGAGAUGGGucaaggcucacaccuucac
.......(((((....)))))(((((((.(((((((((((.((((((...((((((.............)))))).)))))).))))))))))).)))...)))).....

Structure

uacuucaggauugaugagucc    ---   c           C      UUC      Cuuca 
                     ggug   gcu ugguCCAUUUC CUGCCA   CCUUGG     a
                     ||||   ||| ||||||||||| ||||||   ||||||     u
                     ccac   cgg acuGGGUAGAG GACGGU   GGGACc     u
----------------cacuu    acu   a           U      --C      cucau 

Annotation confidence High

Genome context

chr2: 34627123-34627232 [+]

Mature mml-miR-4446-3p

• Accession: MIMAT0024310
• Description: Macaca mulatta mml-miR-4446-3p mature miRNA
• Sequence: 71 - CAGGGCUGGCAGUGAGAUGGG - 91
• Evidence: experimental ; Illumina [1-2]

Mature mml-miR-4446-5p

• Accession: MIMAT0027105
• Description: Macaca mulatta mml-miR-4446-5p mature miRNA
• Sequence: 34 - CCAUUUCCCUGCCAUUCCCUUGGC - 57
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45