Stem-loop ggo-mir-548b

Accession

MI0020808

Description

Gorilla gorilla ggo-mir-548b precursor miRNA

Literature search

1 open access papers mention ggo-mir-548b
(2 sentences)

Sequence

uauuccauuucagacuauauauuuagguuggcgcaaaaguaauugcgguuuuggccuuuauuuucaauggCAAAAACCUCAGUUGCUUUUGugccaaccuaauacuucaca
......................(((((((((((((((((((((((.((((((.(((............))).)))))).))))))))))))))))))))))).........

Structure

uauuccauuucagacuauauau                       c      g   uuuau 
                      uuagguuggcgcaaaaguaauug gguuuu gcc     u
                      ||||||||||||||||||||||| |||||| |||      
                      aauccaaccguGUUUUCGUUGAC CCAAAA Cgg     u
-------------acacuucau                       U      A   uaacu 

Annotation confidence Not enough data

Genome context

chr6: 121339772-121339882 [-]

Mature ggo-miR-548b

• Accession: MIMAT0024260
• Description: Gorilla gorilla ggo-miR-548b mature miRNA
• Sequence: 71 - CAAAAACCUCAGUUGCUUUUG - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116