Stem-loop ggo-mir-1180

Accession

MI0020761

Description

Gorilla gorilla ggo-mir-1180 precursor miRNA

Sequence

gccgcgagucccggcggggcgaagcccgcagcugcuggacccacccggccgggaauagugcuccugguugUUUCCGGCUCGCGUGGGUGUGucggcggcggggccugacac
....((.(((((.(((((......))))).((((((((((((((.(((((((((((((..(....).))))))))))).)).))))))...))))))))))))).))....

Structure

gccg  a     ggcggggcgaagcccgca        ---      c  -           ug u 
    cg guccc                  gcugcugg   acccac cg gccgggaauag  c c
    || |||||                  ||||||||   |||||| || |||||||||||  |  
    gu cgggg                  cggcggcu   UGGGUG GC CGGCCUUUguu  g c
caca  c     ------------------        GUG      C  U           -g u 

Annotation confidence Not enough data

Genome context

chr5: 59471189-59471299 [+]

Mature ggo-miR-1180

• Accession: MIMAT0024214
• Description: Gorilla gorilla ggo-miR-1180 mature miRNA
• Sequence: 71 - UUUCCGGCUCGCGUGGGUGUG - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116