Stem-loop ggo-mir-130b

Accession

MI0020703

Description

Gorilla gorilla ggo-mir-130b precursor miRNA

Sequence

cccugggggaggcacuggcaggccugcccgacacucuuucccuguugcacuacuaugggccgcugggaagCAGUGCAAUGAUGAAAGGGCAucggucagguccggccugc
(((...)))..(((..(((.((((((.((((..(((((((..(((((((((..........(((....))))))))))))..)))))))..)))).))))))..))))))

Structure

cccugggggag   cu   -a      c    ca       cc         acuaugggcc   g 
           gca  ggc  ggccug ccga  cucuuuc  uguugcacu          gcu g
           |||  |||  |||||| ||||  |||||||  |||||||||          |||  
           cgu  ccg  cuggac ggcu  GGGAAAG  GUAACGUGA          Cga g
-----------   --   gc      u    AC       UA         ----------   a 

Annotation confidence Not enough data

Genome context

chr22: 5015164-5015273 [+]

Mature ggo-miR-130b

• Accession: MIMAT0024156
• Description: Gorilla gorilla ggo-miR-130b mature miRNA
• Sequence: 71 - CAGUGCAAUGAUGAAAGGGCA - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116