Stem-loop ggo-mir-192

Accession

MI0020666

Description

Gorilla gorilla ggo-mir-192 precursor miRNA

Literature search

1 open access papers mention ggo-mir-192
(1 sentences)

Sequence

487316 reads, 27847.0 reads per million, 4 experiments

gagaccgagugcacagggcuCUGACCUAUGAAUUGACAGCCAgugcucucgucuccccucuggCUGCCAAUUCCAUAGGUCACAGguauguucgccucaaugccagccacca
......(((.(((((.(.((.((((((((((((((.(((((((................))))))).))))).))))))))).)).).)))..)))))..............

Structure

--------gagacc   u  --   g g  C         -     A       ugcucuc 
              gag gc  aca g cu UGACCUAUG AAUUG CAGCCAg       g
              ||| ||  ||| | || ||||||||| ||||| |||||||        
              cuc cg  ugu u GA ACUGGAUAC UUAAC GUCgguc       u
accaccgaccguaa   -  cu   a g  C         C     C       uccccuc 

Annotation confidence High

Genome context

chr11: 64077403-64077514 [-]

Mature ggo-miR-192-5p

• Accession: MIMAT0024119
• Description: Gorilla gorilla ggo-miR-192-5p mature miRNA
• Sequence: 21 - CUGACCUAUGAAUUGACAGCCA - 42
• Evidence: experimental ; Illumina [1]

Mature ggo-miR-192-3p

• Accession: MIMAT0061303
• Description: Gorilla gorilla ggo-miR-192-3p mature miRNA
• Sequence: 64 - CUGCCAAUUCCAUAGGUCACAG - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116