Stem-loop ggo-mir-330

Accession

MI0020635

Description

Gorilla gorilla ggo-mir-330 precursor miRNA

Sequence

24336 reads, 1908.0 reads per million, 4 experiments

ucgugcugugugaucuuuggcgaucacugccUCUCUGGGCCUGUGUCUUAGGcucugcaagaucaaccgaGCAAAGCACACGGCCUGCAGAGAggcagcgcucugccccuuac
..(((((..((((((......)))))).(((((((((((((((((.(((..((((.............)))).))))))).))))..))))))))))))))............

Structure

----------uc     gugugaucuuuggcgaucacu         --    -    U   AG    ugcaa 
            gugcu                     gccUCUCUG  GGCC UGUG CUU  Gcuc     g
            |||||                     |||||||||  |||| |||| |||  ||||     a
            cgcga                     cggAGAGAC  CCGG ACAC GAA  CGag     u
cauuccccgucu     ---------------------         GU    C    -   -A    ccaac 

Annotation confidence High

Genome context

chr19: 44895367-44895479 [-]

Mature ggo-miR-330-5p

• Accession: MIMAT0061286
• Description: Gorilla gorilla ggo-miR-330-5p mature miRNA
• Sequence: 32 - UCUCUGGGCCUGUGUCUUAGG - 52
• Evidence: experimental ; Illumina [1]

Mature ggo-miR-330-3p

• Accession: MIMAT0024088
• Description: Gorilla gorilla ggo-miR-330-3p mature miRNA
• Sequence: 71 - GCAAAGCACACGGCCUGCAGAGA - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116