Stem-loop ggo-mir-340

Accession

MI0020634

Description

Gorilla gorilla ggo-mir-340 precursor miRNA

Literature search

1 open access papers mention ggo-mir-340
(2 sentences)

Sequence

accguuuguaccuggugugaUUAUAAAGCAAUGAGACUGAUugucauaugucguuugugggauccgucucaguuacuuuauagccauaccugguaucuuauaccacagauc
.......(((((.((((((.((((((((...((((((.((((.(((((.......))))))))).))))))....)))))))).)))))).)))))...............

Structure

--------accguuu     u      a        -CAA      U    g     ug 
               guacc ggugug UUAUAAAG    UGAGAC GAUu ucaua  u
               ||||| |||||| ||||||||    |||||| |||| |||||  c
               uaugg ccauac gauauuuc    acucug cuag ggugu  g
cuagacaccauauuc     u      c        auug      c    -     uu 

Annotation confidence Not enough data

Genome context

chr5: 164075953-164076063 [-]

Mature ggo-miR-340

• Accession: MIMAT0024087
• Description: Gorilla gorilla ggo-miR-340 mature miRNA
• Sequence: 21 - UUAUAAAGCAAUGAGACUGAU - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116