Stem-loop ggo-mir-1

Accession

MI0020625

Description

Gorilla gorilla ggo-mir-1 precursor miRNA

Sequence

agcuaacaacuuaguaauaccuacucagaguacauacuucuuuauguacccauaugaacauacaaugcuaUGGAAUGUAAAGAAGUAUGUAuuuuugguaggcaauaaacc
.(((((....)))))....((((((.(((((((((((((((((((((..(((((..(........)..))))).))))))))))))))))))))).)))))).........

Structure

agcuaacaacuuaguaaua      c                     ac     ug aca 
                   ccuacu agaguacauacuucuuuaugu  ccaua  a   u
                   |||||| |||||||||||||||||||||  |||||  |    
                   ggaugg uuuuAUGUAUGAAGAAAUGUA  GGUau  u   a
----------ccaaauaac      u                     -A     cg aac 

Annotation confidence Not enough data

Genome context

chr18: 18376624-18376734 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-1

Mature ggo-miR-1

• Accession: MIMAT0024078
• Description: Gorilla gorilla ggo-miR-1 mature miRNA
• Sequence: 71 - UGGAAUGUAAAGAAGUAUGUA - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116