Stem-loop ptr-mir-4428

Accession

MI0020616

Description

Pan troglodytes ptr-mir-4428 precursor miRNA

Sequence

aaucuuaugcaaacgggcuuuccacuuggcaggugccauguugccugcuccuuacuguacacguggcuggCAAGGAGACGGGAACAUGGAGCCgccauuuugaacaugccuag
..............((((.(((....((((.(((.(((((((.((((((((((.((((.......)).)).)))))).))))))))))).)))))))....)))...))))..

Structure

aaucuuaugcaaac    --u   cacu    a   g       g    -      a  -  ac 
              gggc   uuc    uggc ggu ccauguu ccug cuccuu cu gu  a
              ||||   |||    |||| ||| ||||||| |||| |||||| || ||  c
              uccg   aag    accg CCG GGUACAA GGGC GAGGAA gg cg  g
------------ga    uac   uuuu    -   A       -    A      C  u  gu 

Annotation confidence Not enough data

Genome context

chr1: 216588554-216588666 [+]

Mature ptr-miR-4428

• Accession: MIMAT0024069
• Description: Pan troglodytes ptr-miR-4428 mature miRNA
• Sequence: 71 - CAAGGAGACGGGAACAUGGAGCC - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116