Stem-loop ptr-mir-3132

Accession

MI0020605

Description

Pan troglodytes ptr-mir-3132 precursor miRNA

Sequence

ugaugaccacuguggugggaUGGGUAGAGAAGGAGCUCAGAggacggugcgccuuguuucccuugagcccuuccucucucaucccaccuguggcucuaggcuuccagauuc
......((((...(((((((((((.((((((((.((((((.(((.((....)).....))).)))))))))).))))))))))))))).)))).(((.((...)))))...

Structure

------------ugauga    ugu           U    -    A      A   ----c  u 
                  ccac   ggugggaUGGG AGAG AAGG GCUCAG gga     gg g
                  ||||   ||||||||||| |||| |||| |||||| |||     ||  
                  ggug   ccacccuacuc ucuc uucc cgaguu ccu     cc c
cuuagaccuucggaucuc    --u           -    c    -      c   uuguu  g 

Annotation confidence Not enough data

Genome context

chr2B: 110468799-110468909 [-]

Mature ptr-miR-3132

• Accession: MIMAT0024058
• Description: Pan troglodytes ptr-miR-3132 mature miRNA
• Sequence: 21 - UGGGUAGAGAAGGAGCUCAGA - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116